ATP-induced conformational changes of the nucleotide binding domain of Na,K-ATPase


NBD
The Na,K-ATPase hydrolyses ATP in order to drive the coupled extrusion and uptake of Na+ and K+ ions across the plasma membrane. Here, we report two high-resolution NMR structures of the 213-residue nucleotide binding domain of rat a1 Na,K-ATPase, determined in the absence and the presence of ATP. The nucleotide binds in the anti-conformation and shows a relative paucity of interactions with the protein which reflects the low-affinity ATP-binding state. Binding of ATP induces substantial conformational changes in the binding pocket and for residues located in the hinge region connecting the N- and P-domain. Comparison with the Ca-ATPase in the E2(TG) and the model of H-ATPase in the E1 form reveals a resemblance of the conformation of the hinge with the native and ATP-bound form of the N-domain of Na,K-ATPase, respectively. Thus, ATP-binding induces a conformational change that likely triggers a series of events necessary for the release of the K+ ions and/or disengagement of the A-domain leading to the eventual transfer of the g-phosphate group to the invariant Asp 369.

PDB codes 1MO7 (native) (Download) and 1MO8 (complex). (Download)

■ Hilge, M, Siegal, G., Vuister, G.W., Guntert, P., Gloor, S.M. & Abrahams, J.P. (2003) “ATP-induced conformational changes of the nucleotide binding domain of Na,K-ATPase”, Nature Struct. Biol. 10, 468-474.